Random Walks, Evolutionary Trends, and Branching Models of Diversification
Summary
Students are exposed to the concept of random walk and how stochastic processes can be applied to constrain interpretation of diversity trends through geologic time.
Context
Audience
upper-level undergraduate course for geology majors; has been used for introductory and historical geology
Skills and concepts that students must have mastered
plotting data
How the activity is situated in the course
This is a lab exercise that complements lectures on the subject in class.
Goals
Content/concepts goals for this activity
diversity trends
random walks and the concept of stochastic processes
confidence intervals
random walks and the concept of stochastic processes
confidence intervals
Higher order thinking skills goals for this activity
Gathering and analyzing data and using a stochastic process to test alternative hypotheses/interpretations.
Other skills goals for this activity
Description of the activity/assignment
In this exercise, students use random numbers drawn from a telephone directory to create a series of phylogenetic trees based on the assumptions of constant probability of origination and extinction per lineage through time. They use these trees to derive diversity trends and compare their model results to a real phylogeny of echinoids to test the model assumptions. They interpret any deviations and propose means of testing their ideas.
Determining whether students have met the goals
The students hand in answers to a series of questions on the lab and the concepts are further tested on class exams.
More information about assessment tools and techniques.Teaching materials and tips
- Activity Description/Assignment:Lab for Stochastic Models of Evolutionary Trees (Acrobat (PDF) 303kB Aug2 09)
- Instructors Notes:
- Solution Set:
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