Teaching Computation in the Sciences Using MATLAB

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Modeling an Neuron Action Potential in Matlab
Marjorie Hubbard, North Carolina School of Science and Math
This lab activity is designed to teach students (1) to transform the Hodgkin-Huxley (HH) membrane model into a programmable set of equations (2) To create a working membrane patch model in MATLAB using HH kinetics ...

Subject: Biology:Anatomy & Physiology, Biology

Using MATLAB to understand distributions: Pokémon GO
Benjamin Bratton, Vanderbilt University
This problem set will help teach students how to describe real world distributions. Data science skills that will be covered include measures of central tendency and spread, transformations of distributions, ...

Subject: Biology
MATLAB Exemplary Collection This activity is part of the Teaching Computation in the Sciences Using MATLAB Exemplary Teaching Activities collection.
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Population Dynamics: Bacterial Growth Curves Provide Data to Calculate Growth Rates and Carrying Capacity
Anne Walter, Saint Olaf College
Bacterial growth rates are monitored by OD and OD converted to cell population density from a standard curve derived from plate counts. The resulting data are used to fit a logistic model solved at discrete time ...

Subject: Biology

Curve Fitting Exercise in MATLAB
Wendy Thomas, University of Washington-Seattle Campus
In this activity, students program using MATLAB to compare the fit of several models to an experimental data set. The activity is designed to teach students with limited MATLAB experience how to write code to fit ...

Subject: Biology, Engineering

Sophomore Bioengineering Final Project
Princess Imoukhuede, Washington University in St. Louis
Description: As a final project, students apply their knowledge of mass conservation to develop computational models of ligand-receptor signaling. Students systemically examine how signals enter cells ...

Subject: Engineering, Biology
MATLAB Exemplary Collection This activity is part of the Teaching Computation in the Sciences Using MATLAB Exemplary Teaching Activities collection.
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Principal Component Analysis
Daniel Zysman, Massachusetts Institute of Technology
Principal Component Analysis on the MNIST data set.

Subject: Biology, Mathematics

Mathematical Analysis of Type 2 Diabetes Predisposition
Gregory Goins, North Carolina A & T State University
In this activity, students will examine the relationship between glucose and insulin in the human body using models based on the physiology of glucose metabolism and insulin secretion. We will view the body and its ...

Subject: Biology:Anatomy & Physiology, Biology

Hodgkin-Huxley Neuron Model
Manuel Hernandez, University of Illinois at Urbana-Champaign
In this lab activity, students will gain a better understanding of the factors underlying the generation of an action potential.

Subject: Biology:Anatomy & Physiology, Biology